Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD4O95243 PRORSD1P-202ENST00000563365 2154 ntBASIC19.61■□□□□ 0.73
MBD4O95243 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
MBD4O95243 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MBD4O95243 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD4O95243 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MBD4O95243 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD4O95243 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MBD4O95243 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.61■□□□□ 0.73
MBD4O95243 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD4O95243 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.61■□□□□ 0.73
MBD4O95243 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD4O95243 AC003101.2-201ENST00000612557 442 ntBASIC19.61■□□□□ 0.73
MBD4O95243 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
MBD4O95243 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.61■□□□□ 0.73
MBD4O95243 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD4O95243 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
MBD4O95243 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD4O95243 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
MBD4O95243 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
MBD4O95243 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 AL390955.2-201ENST00000603032 514 ntBASIC19.6■□□□□ 0.73
MBD4O95243 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD4O95243 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MBD4O95243 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MBD4O95243 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD4O95243 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
MBD4O95243 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.59■□□□□ 0.73
MBD4O95243 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD4O95243 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
MBD4O95243 AC107890.1-201ENST00000422478 521 ntBASIC19.59■□□□□ 0.73
MBD4O95243 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD4O95243 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
MBD4O95243 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD4O95243 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD4O95243 AC005498.2-205ENST00000593218 784 ntBASIC19.59■□□□□ 0.73
MBD4O95243 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MBD4O95243 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD4O95243 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
MBD4O95243 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
MBD4O95243 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD4O95243 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD4O95243 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.58■□□□□ 0.73
MBD4O95243 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD4O95243 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD4O95243 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.58■□□□□ 0.73
MBD4O95243 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
MBD4O95243 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms