Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 HLA-J-202ENST00000469281 1241 ntBASIC17.4■□□□□ 0.38
RTN3O95197 RFPL4AP1-201ENST00000530883 850 ntBASIC17.4■□□□□ 0.38
RTN3O95197 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.4■□□□□ 0.38
RTN3O95197 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RTN3O95197 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.4■□□□□ 0.38
RTN3O95197 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.4■□□□□ 0.38
RTN3O95197 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN3O95197 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 AC005052.1-201ENST00000625181 2492 ntBASIC17.4■□□□□ 0.38
RTN3O95197 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN3O95197 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RTN3O95197 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.39■□□□□ 0.38
RTN3O95197 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.39■□□□□ 0.38
RTN3O95197 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.39■□□□□ 0.37
RTN3O95197 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.39■□□□□ 0.37
RTN3O95197 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.39■□□□□ 0.37
RTN3O95197 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 RBPMS2P1-201ENST00000437762 623 ntBASIC17.39■□□□□ 0.37
RTN3O95197 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.39■□□□□ 0.37
RTN3O95197 AL512356.2-201ENST00000546955 174 ntBASIC17.39■□□□□ 0.37
RTN3O95197 AL138918.1-201ENST00000568306 659 ntBASIC17.39■□□□□ 0.37
RTN3O95197 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.39■□□□□ 0.37
RTN3O95197 AC073389.1-201ENST00000595595 795 ntBASIC17.39■□□□□ 0.37
RTN3O95197 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 AC020765.3-201ENST00000613051 740 ntBASIC17.39■□□□□ 0.37
RTN3O95197 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 AP001059.3-201ENST00000619053 235 ntBASIC17.39■□□□□ 0.37
RTN3O95197 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RTN3O95197 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN3O95197 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN3O95197 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RTN3O95197 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
RTN3O95197 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTN3O95197 AC105020.1-201ENST00000435356 2205 ntBASIC17.38■□□□□ 0.37
RTN3O95197 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RTN3O95197 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN3O95197 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTN3O95197 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN3O95197 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.38■□□□□ 0.37
RTN3O95197 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN3O95197 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN3O95197 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN3O95197 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN3O95197 PRYP6-201ENST00000514804 343 ntBASIC17.38■□□□□ 0.37
RTN3O95197 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.38■□□□□ 0.37
RTN3O95197 SLC25A39P2-201ENST00000537614 270 ntBASIC17.38■□□□□ 0.37
RTN3O95197 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN3O95197 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN3O95197 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN3O95197 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN3O95197 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms