Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 TUBB3P1-201ENST00000405796 1332 ntBASIC17.24■□□□□ 0.35
BEST1O76090 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
BEST1O76090 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.24■□□□□ 0.35
BEST1O76090 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.24■□□□□ 0.35
BEST1O76090 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
BEST1O76090 RNA5SP410-201ENST00000516285 106 ntBASIC17.24■□□□□ 0.35
BEST1O76090 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 DUX4L27-201ENST00000554796 1261 ntBASIC17.24■□□□□ 0.35
BEST1O76090 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.24■□□□□ 0.35
BEST1O76090 AC051619.7-201ENST00000568314 623 ntBASIC17.24■□□□□ 0.35
BEST1O76090 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 REXO1L8P-201ENST00000604378 1897 ntBASIC17.24■□□□□ 0.35
BEST1O76090 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST1O76090 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST1O76090 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST1O76090 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
BEST1O76090 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 U82695.1-201ENST00000635752 1889 ntBASIC17.23■□□□□ 0.35
BEST1O76090 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST1O76090 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.23■□□□□ 0.35
BEST1O76090 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
BEST1O76090 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.23■□□□□ 0.35
BEST1O76090 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BEST1O76090 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
BEST1O76090 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BEST1O76090 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BEST1O76090 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BEST1O76090 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.23■□□□□ 0.35
BEST1O76090 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BEST1O76090 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST1O76090 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BEST1O76090 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST1O76090 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BEST1O76090 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.22■□□□□ 0.35
BEST1O76090 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BEST1O76090 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BEST1O76090 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.22■□□□□ 0.35
BEST1O76090 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BEST1O76090 SPDYE7P-202ENST00000420373 878 ntBASIC17.22■□□□□ 0.35
BEST1O76090 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.22■□□□□ 0.35
BEST1O76090 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.22■□□□□ 0.35
BEST1O76090 FAM86GP-201ENST00000448322 971 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms