Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HCN1O60741 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.48■□□□□ 0.07
HCN1O60741 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.48■□□□□ 0.07
HCN1O60741 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.48■□□□□ 0.07
HCN1O60741 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HCN1O60741 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HCN1O60741 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.48■□□□□ 0.07
HCN1O60741 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
HCN1O60741 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.48■□□□□ 0.07
HCN1O60741 AC018845.2-201ENST00000568326 409 ntBASIC15.48■□□□□ 0.07
HCN1O60741 AC005829.1-201ENST00000570002 483 ntBASIC15.48■□□□□ 0.07
HCN1O60741 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HCN1O60741 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.48■□□□□ 0.07
HCN1O60741 AC006449.5-201ENST00000610658 2098 ntBASIC15.48■□□□□ 0.07
HCN1O60741 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HCN1O60741 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 AC007950.2-201ENST00000615045 2347 ntBASIC15.48■□□□□ 0.07
HCN1O60741 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCN1O60741 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.47■□□□□ 0.07
HCN1O60741 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 AC079328.2-201ENST00000561241 3354 ntBASIC15.47■□□□□ 0.07
HCN1O60741 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.47■□□□□ 0.07
HCN1O60741 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.47■□□□□ 0.07
HCN1O60741 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.47■□□□□ 0.07
HCN1O60741 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.47■□□□□ 0.07
HCN1O60741 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HCN1O60741 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.47■□□□□ 0.07
HCN1O60741 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.47■□□□□ 0.07
HCN1O60741 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.47■□□□□ 0.07
HCN1O60741 AL513523.2-202ENST00000427283 2040 ntBASIC15.47■□□□□ 0.07
HCN1O60741 AC004967.1-201ENST00000453589 447 ntBASIC15.47■□□□□ 0.07
HCN1O60741 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.47■□□□□ 0.07
HCN1O60741 CXCL1P1-201ENST00000502804 216 ntBASIC15.47■□□□□ 0.07
HCN1O60741 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.47■□□□□ 0.07
HCN1O60741 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.47■□□□□ 0.07
HCN1O60741 PDPK2P-202ENST00000562415 1191 ntBASIC15.47■□□□□ 0.07
HCN1O60741 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.47■□□□□ 0.07
HCN1O60741 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.47■□□□□ 0.07
HCN1O60741 AC023141.13-201ENST00000604991 943 ntBASIC15.47■□□□□ 0.07
HCN1O60741 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.47■□□□□ 0.07
HCN1O60741 AC055717.3-201ENST00000622967 595 ntBASIC15.47■□□□□ 0.07
HCN1O60741 C20orf181-201ENST00000623918 480 ntBASIC15.47■□□□□ 0.07
HCN1O60741 AC004877.2-201ENST00000623941 599 ntBASIC15.47■□□□□ 0.07
HCN1O60741 AC092865.6-201ENST00000642101 219 ntBASIC15.47■□□□□ 0.07
HCN1O60741 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.47■□□□□ 0.07
HCN1O60741 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.47■□□□□ 0.07
HCN1O60741 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
HCN1O60741 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
HCN1O60741 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCN1O60741 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HCN1O60741 BCAR1-209ENST00000546196 1340 ntBASIC15.46■□□□□ 0.07
HCN1O60741 AC129492.6-201ENST00000611383 1305 ntBASIC15.46■□□□□ 0.07
HCN1O60741 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HCN1O60741 AC092171.3-201ENST00000610122 2651 ntBASIC15.46■□□□□ 0.07
HCN1O60741 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HCN1O60741 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
HCN1O60741 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 LINC00554-201ENST00000564841 3011 ntBASIC15.46■□□□□ 0.07
HCN1O60741 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms