Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP9BO43861 AC254562.1-201ENST00000417586 456 ntBASIC17.13■□□□□ 0.33
ATP9BO43861 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ATP9BO43861 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP9BO43861 AC112191.1-201ENST00000523689 701 ntBASIC17.13■□□□□ 0.33
ATP9BO43861 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP9BO43861 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP9BO43861 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP9BO43861 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP9BO43861 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP9BO43861 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP9BO43861 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP9BO43861 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP9BO43861 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP9BO43861 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP9BO43861 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP9BO43861 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP9BO43861 SLC22A20-204ENST00000530038 1673 ntBASIC17.13■□□□□ 0.33
ATP9BO43861 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATP9BO43861 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATP9BO43861 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP9BO43861 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 AL662844.4-201ENST00000606367 2838 ntBASIC17.12■□□□□ 0.33
ATP9BO43861 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ATP9BO43861 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP9BO43861 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP9BO43861 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP9BO43861 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP9BO43861 MPDU1-223ENST00000582151 728 ntBASIC17.12■□□□□ 0.33
ATP9BO43861 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ATP9BO43861 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATP9BO43861 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
ATP9BO43861 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP9BO43861 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATP9BO43861 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP9BO43861 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATP9BO43861 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ATP9BO43861 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 HLA-A-202ENST00000376806 1854 ntBASIC17.12■□□□□ 0.33
ATP9BO43861 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP9BO43861 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ATP9BO43861 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP9BO43861 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ATP9BO43861 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 PCDHA1-201ENST00000378133 2726 ntBASIC17.11■□□□□ 0.33
ATP9BO43861 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
ATP9BO43861 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP9BO43861 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP9BO43861 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ATP9BO43861 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP9BO43861 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP9BO43861 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP9BO43861 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP9BO43861 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP9BO43861 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP9BO43861 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP9BO43861 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms