Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXN1O15353 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXN1O15353 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FOXN1O15353 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.63■□□□□ 0.73
FOXN1O15353 AC107918.2-201ENST00000530817 355 ntBASIC19.63■□□□□ 0.73
FOXN1O15353 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXN1O15353 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXN1O15353 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 MIR3615-201ENST00000581999 87 ntBASIC19.63■□□□□ 0.73
FOXN1O15353 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FOXN1O15353 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FOXN1O15353 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
FOXN1O15353 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FOXN1O15353 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXN1O15353 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN1O15353 AC006538.1-201ENST00000567905 1585 ntBASIC19.62■□□□□ 0.73
FOXN1O15353 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 WASH6P-202ENST00000359512 1437 ntBASIC19.62■□□□□ 0.73
FOXN1O15353 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.62■□□□□ 0.73
FOXN1O15353 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 SPDYE19P-201ENST00000338590 713 ntBASIC19.62■□□□□ 0.73
FOXN1O15353 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 MIR663B-201ENST00000408361 115 ntBASIC19.62■□□□□ 0.73
FOXN1O15353 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXN1O15353 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXN1O15353 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXN1O15353 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FOXN1O15353 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
FOXN1O15353 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FOXN1O15353 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN1O15353 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FOXN1O15353 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FOXN1O15353 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN1O15353 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FOXN1O15353 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXN1O15353 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXN1O15353 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN1O15353 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN1O15353 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FOXN1O15353 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN1O15353 IGHV3-52-201ENST00000519770 353 ntBASIC19.61■□□□□ 0.73
FOXN1O15353 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 AC004790.1-201ENST00000612686 536 ntBASIC19.61■□□□□ 0.73
FOXN1O15353 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FOXN1O15353 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXN1O15353 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXN1O15353 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXN1O15353 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 UBALD1-205ENST00000590891 2641 ntBASIC19.61■□□□□ 0.73
FOXN1O15353 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN1O15353 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN1O15353 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms