Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UPK1AO00322 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UPK1AO00322 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 GGT3P-204ENST00000453783 1664 ntBASIC15.67■□□□□ 0.1
UPK1AO00322 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1AO00322 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.66■□□□□ 0.1
UPK1AO00322 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 AL512652.2-201ENST00000625156 1716 ntBASIC15.66■□□□□ 0.1
UPK1AO00322 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 HCG4-201ENST00000418983 998 ntBASIC15.66■□□□□ 0.1
UPK1AO00322 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.66■□□□□ 0.1
UPK1AO00322 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.66■□□□□ 0.1
UPK1AO00322 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.66■□□□□ 0.1
UPK1AO00322 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 ACTL9-202ENST00000612068 1252 ntBASIC15.66■□□□□ 0.1
UPK1AO00322 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 AC068418.2-201ENST00000577309 3703 ntBASIC15.66■□□□□ 0.1
UPK1AO00322 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
UPK1AO00322 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1AO00322 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1AO00322 AC013268.4-201ENST00000637413 2228 ntBASIC15.66■□□□□ 0.1
UPK1AO00322 GGT4P-201ENST00000623672 1708 ntBASIC15.65■□□□□ 0.1
UPK1AO00322 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1AO00322 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1AO00322 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UPK1AO00322 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.65■□□□□ 0.1
UPK1AO00322 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.65■□□□□ 0.1
UPK1AO00322 VN2R19P-201ENST00000442399 1052 ntBASIC15.65■□□□□ 0.1
UPK1AO00322 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.65■□□□□ 0.1
UPK1AO00322 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.65■□□□□ 0.1
UPK1AO00322 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UPK1AO00322 AP001350.2-201ENST00000625104 1094 ntBASIC15.65■□□□□ 0.1
UPK1AO00322 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 AC022532.1-201ENST00000624563 1728 ntBASIC15.65■□□□□ 0.1
UPK1AO00322 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1AO00322 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UPK1AO00322 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1AO00322 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
UPK1AO00322 AC073347.1-201ENST00000421633 2643 ntBASIC15.64■□□□□ 0.1
UPK1AO00322 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 AP005117.1-202ENST00000581724 1908 ntBASIC15.64■□□□□ 0.09
UPK1AO00322 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms