Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CFAP99D6REC4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 HLA-A-202ENST00000376806 1854 ntBASIC16.52■□□□□ 0.23
CFAP99D6REC4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.52■□□□□ 0.23
CFAP99D6REC4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CFAP99D6REC4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CFAP99D6REC4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CFAP99D6REC4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CFAP99D6REC4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AL671710.1-201ENST00000610245 2349 ntBASIC16.5■□□□□ 0.23
CFAP99D6REC4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AC023274.1-201ENST00000418278 595 ntBASIC16.5■□□□□ 0.23
CFAP99D6REC4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AC140658.5-201ENST00000438532 169 ntBASIC16.5■□□□□ 0.23
CFAP99D6REC4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AC109635.5-201ENST00000533593 962 ntBASIC16.5■□□□□ 0.23
CFAP99D6REC4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AL513190.1-201ENST00000621254 727 ntBASIC16.5■□□□□ 0.23
CFAP99D6REC4 SNX33P1-201ENST00000592116 1762 ntBASIC16.5■□□□□ 0.23
CFAP99D6REC4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFAP99D6REC4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CFAP99D6REC4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms