Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 KRT18P1-202ENST00000452408 1331 ntBASIC17.97■□□□□ 0.47
CCDC66A2RUB6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 GRK6P1-201ENST00000400595 1711 ntBASIC17.96■□□□□ 0.47
CCDC66A2RUB6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 DRAXINP1-201ENST00000437611 948 ntBASIC17.96■□□□□ 0.47
CCDC66A2RUB6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 FAM86EP-206ENST00000510506 987 ntBASIC17.96■□□□□ 0.47
CCDC66A2RUB6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC66A2RUB6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC66A2RUB6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
CCDC66A2RUB6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 ACTG1P4-201ENST00000425123 1122 ntBASIC17.95■□□□□ 0.46
CCDC66A2RUB6 TSSC2-201ENST00000450217 709 ntBASIC17.95■□□□□ 0.46
CCDC66A2RUB6 MINOS1P3-201ENST00000457048 203 ntBASIC17.95■□□□□ 0.46
CCDC66A2RUB6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 OR2I1P-210ENST00000642037 4691 ntBASIC17.95■□□□□ 0.46
CCDC66A2RUB6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC66A2RUB6 AL161772.1-201ENST00000610494 4412 ntBASIC17.95■□□□□ 0.46
CCDC66A2RUB6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms