Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 AC012569.1-201ENST00000591191 1524 ntBASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPDC1A2A3K4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 AC004461.1-201ENST00000412461 403 ntBASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 AC004835.2-201ENST00000603762 682 ntBASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 AL513210.1-201ENST00000629608 234 ntBASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 LINC02199-201ENST00000506655 2702 ntBASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPDC1A2A3K4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPDC1A2A3K4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPDC1A2A3K4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 HMGN1P19-201ENST00000436976 333 ntBASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 MTHFR-217ENST00000641820 1569 ntBASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPDC1A2A3K4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 TIMM8BP1-201ENST00000452384 211 ntBASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms