Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 LETM1P2-201ENST00000597330 2178 ntBASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 AC078925.2-201ENST00000624013 1973 ntBASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 KLF2P4-201ENST00000451959 1225 ntBASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 AL022328.1-201ENST00000610050 478 ntBASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 GPR182-203ENST00000622922 591 ntBASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 AC005915.1-201ENST00000624912 2018 ntBASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 AC120045.2-201ENST00000567334 178 ntBASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPBQ9Y5S2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 MSTO2P-201ENST00000314835 1709 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AL691432.1-201ENST00000596308 1422 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 MIR1247-201ENST00000408206 136 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 ACTG1P3-201ENST00000431775 1114 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 HNRNPUP1-201ENST00000554987 333 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AC133539.2-201ENST00000604757 467 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AC009542.2-202ENST00000619004 1067 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 AL592424.1-201ENST00000563624 1536 ntBASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CDC42BPBQ9Y5S2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 SOCS2P1-201ENST00000417727 557 ntBASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 KRT90P-201ENST00000549264 1064 ntBASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC24.42■■□□□ 1.5
CDC42BPBQ9Y5S2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 AC020907.1-201ENST00000616460 1350 ntBASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms