Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 AC113404.2-201ENST00000507884 177 ntBASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 AC005912.2-201ENST00000619492 2400 ntBASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAPPC1Q9Y5R8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 AC004817.3-201ENST00000602957 2129 ntBASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 AP003680.1-201ENST00000598970 3660 ntBASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 LINC00895-201ENST00000629028 1637 ntBASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 IGHV3-52-201ENST00000519770 353 ntBASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 AC005837.3-201ENST00000612163 286 ntBASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 KRT16P1-201ENST00000399124 1418 ntBASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAPPC1Q9Y5R8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms