Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 AL033527.5-202ENST00000641632 1098 ntBASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 AL031731.1-201ENST00000642131 2094 ntBASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.66■□□□□ 0.42
PCDHB7Q9Y5E2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 DGCR5-201ENST00000399539 862 ntBASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 HLA-J-202ENST00000469281 1241 ntBASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC093004.1-201ENST00000508850 424 ntBASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 AC026471.1-201ENST00000564629 3026 ntBASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB7Q9Y5E2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
PCDHB7Q9Y5E2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHB7Q9Y5E2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB7Q9Y5E2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 AP006294.1-201ENST00000415407 339 ntBASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB7Q9Y5E2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB7Q9Y5E2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms