Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 EMD-201ENST00000369835 966 ntTSL 3 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 MYCLP1-201ENST00000372451 1075 ntBASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 ABCD1P5-201ENST00000445663 754 ntBASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 FAAHP1-202ENST00000446499 1238 ntBASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 SAPCD2P3-201ENST00000455031 850 ntBASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 RN7SL510P-201ENST00000581311 263 ntBASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 FAM45BP-202ENST00000592932 1624 ntBASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
R3HCC1Q9Y3T6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AC109462.3-201ENST00000573934 613 ntBASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.99■□□□□ 0.63
R3HCC1Q9Y3T6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 AC138035.3-201ENST00000622706 2791 ntBASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 RBM17P3-201ENST00000417687 1192 ntBASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 UNC93B7-201ENST00000509439 705 ntBASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 REXO1L6P-202ENST00000619970 1078 ntBASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms