Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 MIR4469-201ENST00000583919 79 ntBASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPH3AQ9Y2J0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AGGF1P2-201ENST00000426656 2106 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AC140658.5-201ENST00000438532 169 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 CEND1P1-201ENST00000451006 455 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AC112191.1-201ENST00000523689 701 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 MIR4492-201ENST00000581627 80 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AL596442.2-201ENST00000610240 980 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 AC092850.2-201ENST00000623821 2697 ntBASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPH3AQ9Y2J0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms