Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 AC240504.1-201ENST00000395709 845 ntBASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 RNA5SP423-201ENST00000517127 109 ntBASIC15.69■□□□□ 0.1
LHX6Q9UPM6 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 AC018529.1-201ENST00000613063 361 ntBASIC15.69■□□□□ 0.1
LHX6Q9UPM6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 AC084018.2-201ENST00000613093 2607 ntBASIC15.69■□□□□ 0.1
LHX6Q9UPM6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 BOLA2P3-201ENST00000404566 256 ntBASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AC135586.1-201ENST00000539323 574 ntBASIC15.68■□□□□ 0.1
LHX6Q9UPM6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AL139099.5-201ENST00000635274 300 ntBASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AC004840.1-201ENST00000636359 365 ntBASIC15.68■□□□□ 0.1
LHX6Q9UPM6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 AC087499.5-201ENST00000452760 1342 ntBASIC15.68■□□□□ 0.1
LHX6Q9UPM6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX6Q9UPM6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms