Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 DBET-201ENST00000630918 3363 ntBASIC14.79□□□□□ -0.04
COPS3Q9UNS2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COPS3Q9UNS2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.78□□□□□ -0.04
COPS3Q9UNS2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
COPS3Q9UNS2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COPS3Q9UNS2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 RBM17P3-201ENST00000417687 1192 ntBASIC14.77□□□□□ -0.05
COPS3Q9UNS2 PMS2P1-201ENST00000431037 1228 ntBASIC14.77□□□□□ -0.05
COPS3Q9UNS2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 SLC25A6P2-201ENST00000497974 877 ntBASIC14.77□□□□□ -0.05
COPS3Q9UNS2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 MTDHP3-201ENST00000594186 672 ntBASIC14.77□□□□□ -0.05
COPS3Q9UNS2 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.77□□□□□ -0.05
COPS3Q9UNS2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 REXO1L8P-201ENST00000604378 1897 ntBASIC14.77□□□□□ -0.05
COPS3Q9UNS2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 AC131009.4-201ENST00000624048 1740 ntBASIC14.77□□□□□ -0.05
COPS3Q9UNS2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COPS3Q9UNS2 SLC22A20-204ENST00000530038 1673 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms