Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 AC079781.3-201ENST00000449110 356 ntBASIC16.03■□□□□ 0.16
SNX6Q9UNH7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 AL773604.1-201ENST00000617417 272 ntBASIC16.03■□□□□ 0.16
SNX6Q9UNH7 AC148477.8-201ENST00000624298 468 ntBASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.03■□□□□ 0.16
SNX6Q9UNH7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SNX6Q9UNH7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 PRSS29P-201ENST00000440800 595 ntBASIC16.02■□□□□ 0.16
SNX6Q9UNH7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 AL691432.3-201ENST00000621860 400 ntBASIC16.02■□□□□ 0.16
SNX6Q9UNH7 AC117500.6-201ENST00000624871 588 ntBASIC16.02■□□□□ 0.16
SNX6Q9UNH7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX6Q9UNH7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.02■□□□□ 0.15
SNX6Q9UNH7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.02■□□□□ 0.15
SNX6Q9UNH7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 AC006449.6-201ENST00000612330 2296 ntBASIC16.01■□□□□ 0.15
SNX6Q9UNH7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 AL450487.1-201ENST00000426799 995 ntBASIC16.01■□□□□ 0.15
SNX6Q9UNH7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 FAM185BP-201ENST00000443595 716 ntBASIC16.01■□□□□ 0.15
SNX6Q9UNH7 AC092910.1-201ENST00000482027 1129 ntBASIC16.01■□□□□ 0.15
SNX6Q9UNH7 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.01■□□□□ 0.15
SNX6Q9UNH7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.01■□□□□ 0.15
SNX6Q9UNH7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms