Protein–RNA interactions for Protein: Q9NUS5

AP5S1, AP-5 complex subunit sigma-1, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP5S1Q9NUS5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP5S1Q9NUS5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
AP5S1Q9NUS5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP5S1Q9NUS5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP5S1Q9NUS5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP5S1Q9NUS5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
AP5S1Q9NUS5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP5S1Q9NUS5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 AC002310.6-201ENST00000624451 1377 ntBASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 LINC01568-207ENST00000641790 1380 ntBASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 GPR89P-201ENST00000407924 1495 ntBASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.26□□□□□ -0.45
AP5S1Q9NUS5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 AP000523.1-201ENST00000398242 1049 ntBASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 ATP5G1P1-201ENST00000448724 379 ntBASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 IGHV3-52-201ENST00000519770 353 ntBASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 AP003041.3-201ENST00000527151 707 ntBASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 MIR193BHG-211ENST00000641433 5365 ntBASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 SNX18-202ENST00000343017 3140 ntBASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP5S1Q9NUS5 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms