Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 LINC01225-203ENST00000563550 1244 ntBASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 LINC02199-201ENST00000506655 2702 ntBASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AL589702.1-201ENST00000641229 1509 ntBASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 AC026120.1-201ENST00000611536 926 ntBASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 ELL2P1-201ENST00000413990 1906 ntBASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BLOC1S4Q9NUP1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 RPSAP43-201ENST00000402237 625 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 GPX1P2-201ENST00000429271 606 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 SPCS2P4-201ENST00000436160 681 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 ACTG1P14-201ENST00000446382 1122 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AC112482.1-201ENST00000492080 688 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 YBX1P5-201ENST00000509441 847 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AC027307.2-201ENST00000591252 911 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms