Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ATP5G2P1-201ENST00000433580 426 ntBASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 KRT18P21-201ENST00000515767 1272 ntBASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AC138894.3-201ENST00000603787 634 ntBASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AC020765.3-201ENST00000613051 740 ntBASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AC004706.3-202ENST00000621574 984 ntBASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 CDC14C-201ENST00000428251 1719 ntBASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 PMS2P1-201ENST00000431037 1228 ntBASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 LINC02447-202ENST00000501888 2146 ntBASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 AC087641.1-201ENST00000557561 1021 ntBASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 MTDHP3-201ENST00000594186 672 ntBASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 AC092119.3-201ENST00000612618 583 ntBASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE2Q9NRR3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE2Q9NRR3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.4□□□□□ -0.59
CDC42SE2Q9NRR3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.4□□□□□ -0.59
CDC42SE2Q9NRR3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE2Q9NRR3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE2Q9NRR3 SLC22A20-204ENST00000530038 1673 ntBASIC11.4□□□□□ -0.59
CDC42SE2Q9NRR3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 AC112504.1-201ENST00000623415 1841 ntBASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms