Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 RCN1P2-201ENST00000398357 915 ntBASIC20.35■□□□□ 0.85
UPF2Q9HAU5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 POU5F1P6-201ENST00000466990 990 ntBASIC20.35■□□□□ 0.85
UPF2Q9HAU5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 MST1L-201ENST00000442552 2185 ntBASIC20.35■□□□□ 0.85
UPF2Q9HAU5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 KRT18P1-202ENST00000452408 1331 ntBASIC20.34■□□□□ 0.85
UPF2Q9HAU5 AL590787.1-201ENST00000568856 1315 ntBASIC20.34■□□□□ 0.85
UPF2Q9HAU5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 AC104076.2-201ENST00000448912 469 ntBASIC20.34■□□□□ 0.85
UPF2Q9HAU5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 BNIP3P18-201ENST00000593976 575 ntBASIC20.34■□□□□ 0.85
UPF2Q9HAU5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 AC010331.1-201ENST00000611423 582 ntBASIC20.34■□□□□ 0.85
UPF2Q9HAU5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF2Q9HAU5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 AP005117.1-202ENST00000581724 1908 ntBASIC20.33■□□□□ 0.85
UPF2Q9HAU5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 AC114341.1-201ENST00000618070 349 ntBASIC20.33■□□□□ 0.85
UPF2Q9HAU5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
UPF2Q9HAU5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 KRT8P39-201ENST00000396270 1433 ntBASIC20.33■□□□□ 0.84
UPF2Q9HAU5 SNX33P1-201ENST00000592116 1762 ntBASIC20.33■□□□□ 0.84
UPF2Q9HAU5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF2Q9HAU5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms