Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK3Q9H422 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.92■□□□□ 0.46
HIPK3Q9H422 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK3Q9H422 AC092552.1-201ENST00000547243 906 ntBASIC17.92■□□□□ 0.46
HIPK3Q9H422 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK3Q9H422 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.92■□□□□ 0.46
HIPK3Q9H422 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.92■□□□□ 0.46
HIPK3Q9H422 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.92■□□□□ 0.46
HIPK3Q9H422 AL606495.2-201ENST00000605867 535 ntBASIC17.92■□□□□ 0.46
HIPK3Q9H422 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.92■□□□□ 0.46
HIPK3Q9H422 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.92■□□□□ 0.46
HIPK3Q9H422 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK3Q9H422 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HIPK3Q9H422 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 AC245100.3-201ENST00000441281 285 ntBASIC17.91■□□□□ 0.46
HIPK3Q9H422 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 WFDC1-204ENST00000613603 549 ntBASIC17.91■□□□□ 0.46
HIPK3Q9H422 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HIPK3Q9H422 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK3Q9H422 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 REXO1L6P-201ENST00000603433 1515 ntBASIC17.9■□□□□ 0.46
HIPK3Q9H422 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 MIR6775-201ENST00000617557 69 ntBASIC17.9■□□□□ 0.46
HIPK3Q9H422 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HIPK3Q9H422 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIPK3Q9H422 AC012313.1-201ENST00000593393 3059 ntBASIC17.9■□□□□ 0.46
HIPK3Q9H422 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HIPK3Q9H422 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HIPK3Q9H422 AC090340.1-201ENST00000620778 4980 ntBASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms