Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 TERC-201ENST00000602385 541 ntBASIC18.79■□□□□ 0.6
CCDC94Q9BW85 AC008667.4-201ENST00000607370 168 ntBASIC18.79■□□□□ 0.6
CCDC94Q9BW85 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 PTCHD3P3-201ENST00000403073 906 ntBASIC18.78■□□□□ 0.6
CCDC94Q9BW85 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 MED15P5-201ENST00000423150 992 ntBASIC18.78■□□□□ 0.6
CCDC94Q9BW85 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 AL591424.1-201ENST00000442569 1213 ntBASIC18.78■□□□□ 0.6
CCDC94Q9BW85 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 POLD2P1-201ENST00000511220 997 ntBASIC18.78■□□□□ 0.6
CCDC94Q9BW85 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC94Q9BW85 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 AP002414.1-201ENST00000391405 1147 ntBASIC18.77■□□□□ 0.6
CCDC94Q9BW85 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 IGHV3-65-201ENST00000523210 341 ntBASIC18.77■□□□□ 0.6
CCDC94Q9BW85 AC140113.2-201ENST00000604370 208 ntBASIC18.77■□□□□ 0.6
CCDC94Q9BW85 FAM197Y3-203ENST00000618346 717 ntBASIC18.77■□□□□ 0.6
CCDC94Q9BW85 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC94Q9BW85 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCDC94Q9BW85 AL590787.1-201ENST00000568856 1315 ntBASIC18.76■□□□□ 0.59
CCDC94Q9BW85 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC94Q9BW85 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC94Q9BW85 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC94Q9BW85 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC94Q9BW85 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms