Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 SIGLEC30P-201ENST00000455569 941 ntBASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 AP002490.2-201ENST00000524791 560 ntBASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 AC106730.1-201ENST00000566722 1090 ntBASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA1CQ9BQE3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 MIR574-201ENST00000385209 96 ntBASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBA1CQ9BQE3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms