Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRGV9Q99603 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.91□□□□□ -0.34
TRGV9Q99603 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRGV9Q99603 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRGV9Q99603 AC010491.1-201ENST00000563101 2797 ntBASIC12.91□□□□□ -0.34
TRGV9Q99603 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.91□□□□□ -0.34
TRGV9Q99603 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRGV9Q99603 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV9Q99603 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
TRGV9Q99603 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV9Q99603 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.9□□□□□ -0.34
TRGV9Q99603 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.9□□□□□ -0.34
TRGV9Q99603 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV9Q99603 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
TRGV9Q99603 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TRGV9Q99603 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV9Q99603 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV9Q99603 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV9Q99603 MIR3652-201ENST00000579335 131 ntBASIC12.9□□□□□ -0.34
TRGV9Q99603 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.9□□□□□ -0.34
TRGV9Q99603 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
TRGV9Q99603 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRGV9Q99603 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 CDC14C-201ENST00000428251 1719 ntBASIC12.9□□□□□ -0.34
TRGV9Q99603 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.9□□□□□ -0.34
TRGV9Q99603 AL513477.1-201ENST00000602865 2407 ntBASIC12.9□□□□□ -0.34
TRGV9Q99603 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV9Q99603 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.9□□□□□ -0.35
TRGV9Q99603 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV9Q99603 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV9Q99603 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV9Q99603 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.9□□□□□ -0.35
TRGV9Q99603 AP005117.1-202ENST00000581724 1908 ntBASIC12.9□□□□□ -0.35
TRGV9Q99603 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV9Q99603 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV9Q99603 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV9Q99603 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV9Q99603 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV9Q99603 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 LINC02447-202ENST00000501888 2146 ntBASIC12.89□□□□□ -0.35
TRGV9Q99603 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRGV9Q99603 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.89□□□□□ -0.35
TRGV9Q99603 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV9Q99603 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV9Q99603 MST1L-201ENST00000442552 2185 ntBASIC12.89□□□□□ -0.35
TRGV9Q99603 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV9Q99603 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms