Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC091304.2-201ENST00000564639 760 ntBASIC17.51■□□□□ 0.39
CALR3Q96L12 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.51■□□□□ 0.39
CALR3Q96L12 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.51■□□□□ 0.39
CALR3Q96L12 REXO1L8P-201ENST00000604378 1897 ntBASIC17.51■□□□□ 0.39
CALR3Q96L12 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.51■□□□□ 0.39
CALR3Q96L12 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.51■□□□□ 0.39
CALR3Q96L12 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.51■□□□□ 0.39
CALR3Q96L12 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.51■□□□□ 0.39
CALR3Q96L12 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CALR3Q96L12 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CALR3Q96L12 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CALR3Q96L12 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CALR3Q96L12 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CALR3Q96L12 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CALR3Q96L12 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.5■□□□□ 0.39
CALR3Q96L12 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 AC008667.4-201ENST00000607370 168 ntBASIC17.5■□□□□ 0.39
CALR3Q96L12 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.5■□□□□ 0.39
CALR3Q96L12 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 AL592424.1-201ENST00000563624 1536 ntBASIC17.5■□□□□ 0.39
CALR3Q96L12 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.5■□□□□ 0.39
CALR3Q96L12 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.5■□□□□ 0.39
CALR3Q96L12 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.5■□□□□ 0.39
CALR3Q96L12 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
CALR3Q96L12 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.5■□□□□ 0.39
CALR3Q96L12 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALR3Q96L12 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.49■□□□□ 0.39
CALR3Q96L12 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.49■□□□□ 0.39
CALR3Q96L12 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.49■□□□□ 0.39
CALR3Q96L12 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.49■□□□□ 0.39
CALR3Q96L12 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.49■□□□□ 0.39
CALR3Q96L12 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 SAPCD2P3-201ENST00000455031 850 ntBASIC17.49■□□□□ 0.39
CALR3Q96L12 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CALR3Q96L12 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.49■□□□□ 0.39
CALR3Q96L12 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.49■□□□□ 0.39
CALR3Q96L12 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CALR3Q96L12 AC093458.2-201ENST00000623150 629 ntBASIC17.49■□□□□ 0.39
CALR3Q96L12 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CALR3Q96L12 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.49■□□□□ 0.39
CALR3Q96L12 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALR3Q96L12 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.49■□□□□ 0.39
CALR3Q96L12 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CALR3Q96L12 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.48■□□□□ 0.39
CALR3Q96L12 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CALR3Q96L12 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CALR3Q96L12 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CALR3Q96L12 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 AC010491.1-201ENST00000563101 2797 ntBASIC17.48■□□□□ 0.39
CALR3Q96L12 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms