Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 OR6D1P-203ENST00000641209 4860 ntBASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 FDX1P1-201ENST00000449115 551 ntBASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 FGFR3P6-201ENST00000457012 610 ntBASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 AC010654.1-201ENST00000615722 808 ntBASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 AC004706.3-202ENST00000621574 984 ntBASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHAMP1Q96JM3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 KRT16P4-201ENST00000453883 522 ntBASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 MTDHP4-201ENST00000600287 670 ntBASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 AC069224.1-201ENST00000566372 1715 ntBASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHAMP1Q96JM3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms