Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 HCG4B-203ENST00000450128 991 ntBASIC15.88■□□□□ 0.13
VMP1Q96GC9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 AC005915.1-201ENST00000624912 2018 ntBASIC15.88■□□□□ 0.13
VMP1Q96GC9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 AC024909.3-201ENST00000611513 2257 ntBASIC15.88■□□□□ 0.13
VMP1Q96GC9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VMP1Q96GC9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VMP1Q96GC9 AC104640.1-201ENST00000562617 2109 ntBASIC15.88■□□□□ 0.13
VMP1Q96GC9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 AC126755.1-201ENST00000525846 6405 ntBASIC15.87■□□□□ 0.13
VMP1Q96GC9 AL136379.1-201ENST00000623471 2642 ntBASIC15.87■□□□□ 0.13
VMP1Q96GC9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 AC040169.1-201ENST00000565382 521 ntBASIC15.87■□□□□ 0.13
VMP1Q96GC9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.87■□□□□ 0.13
VMP1Q96GC9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VMP1Q96GC9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VMP1Q96GC9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VMP1Q96GC9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.86■□□□□ 0.13
VMP1Q96GC9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms