Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 AC006538.1-201ENST00000567905 1585 ntBASIC19.62■□□□□ 0.73
DDX11Q96FC9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 AC129492.6-201ENST00000611383 1305 ntBASIC19.62■□□□□ 0.73
DDX11Q96FC9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 AC004835.2-201ENST00000603762 682 ntBASIC19.62■□□□□ 0.73
DDX11Q96FC9 ACTL9-202ENST00000612068 1252 ntBASIC19.62■□□□□ 0.73
DDX11Q96FC9 AC106028.4-201ENST00000614509 607 ntBASIC19.62■□□□□ 0.73
DDX11Q96FC9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 SNX33P1-201ENST00000592116 1762 ntBASIC19.62■□□□□ 0.73
DDX11Q96FC9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX11Q96FC9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX11Q96FC9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 TSEN15P1-201ENST00000423257 515 ntBASIC19.61■□□□□ 0.73
DDX11Q96FC9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 MPDU1-223ENST00000582151 728 ntBASIC19.61■□□□□ 0.73
DDX11Q96FC9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 AC013467.2-201ENST00000605472 835 ntBASIC19.61■□□□□ 0.73
DDX11Q96FC9 LINC02084-201ENST00000606069 1096 ntBASIC19.61■□□□□ 0.73
DDX11Q96FC9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX11Q96FC9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX11Q96FC9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 AC112191.1-201ENST00000523689 701 ntBASIC19.6■□□□□ 0.73
DDX11Q96FC9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 AC004449.1-201ENST00000564240 433 ntBASIC19.6■□□□□ 0.73
DDX11Q96FC9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms