Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 AC036164.1-201ENST00000570544 333 ntBASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 PCDHB17P-201ENST00000539533 2393 ntBASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 CYP4F24P-201ENST00000586049 1580 ntBASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM43Q96BQ3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 AC092068.3-201ENST00000587894 2016 ntBASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 RPL13AP20-201ENST00000459725 609 ntBASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 RNA5SP423-201ENST00000517127 109 ntBASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 AC068587.3-201ENST00000526613 355 ntBASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 AC009542.2-202ENST00000619004 1067 ntBASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM43Q96BQ3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms