Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AL592309.1-201ENST00000443127 649 ntBASIC14.64□□□□□ -0.07
APH1AQ96BI3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 AP001160.2-201ENST00000596071 487 ntBASIC14.64□□□□□ -0.07
APH1AQ96BI3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.64□□□□□ -0.07
APH1AQ96BI3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 GGT4P-201ENST00000623672 1708 ntBASIC14.63□□□□□ -0.07
APH1AQ96BI3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 UBALD1-205ENST00000590891 2641 ntBASIC14.63□□□□□ -0.07
APH1AQ96BI3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 AC004461.1-201ENST00000412461 403 ntBASIC14.63□□□□□ -0.07
APH1AQ96BI3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 AC005237.2-201ENST00000434368 219 ntBASIC14.63□□□□□ -0.07
APH1AQ96BI3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 AC243562.1-201ENST00000560672 389 ntBASIC14.63□□□□□ -0.07
APH1AQ96BI3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APH1AQ96BI3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
APH1AQ96BI3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.62□□□□□ -0.07
APH1AQ96BI3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
APH1AQ96BI3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
APH1AQ96BI3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.62□□□□□ -0.07
APH1AQ96BI3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
APH1AQ96BI3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
APH1AQ96BI3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.62□□□□□ -0.07
APH1AQ96BI3 SPCS2P4-201ENST00000436160 681 ntBASIC14.62□□□□□ -0.07
APH1AQ96BI3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APH1AQ96BI3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms