Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR4492-201ENST00000581627 80 ntBASIC15.94■□□□□ 0.14
VPS33AQ96AX1 MPDU1-223ENST00000582151 728 ntBASIC15.94■□□□□ 0.14
VPS33AQ96AX1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 AC144831.1-201ENST00000573312 2656 ntBASIC15.94■□□□□ 0.14
VPS33AQ96AX1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 REXO1L8P-201ENST00000604378 1897 ntBASIC15.93■□□□□ 0.14
VPS33AQ96AX1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 NKAPP1-205ENST00000585790 367 ntBASIC15.93■□□□□ 0.14
VPS33AQ96AX1 AC138894.3-201ENST00000603787 634 ntBASIC15.93■□□□□ 0.14
VPS33AQ96AX1 AC092119.3-201ENST00000612618 583 ntBASIC15.93■□□□□ 0.14
VPS33AQ96AX1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 KRT8P39-201ENST00000396270 1433 ntBASIC15.93■□□□□ 0.14
VPS33AQ96AX1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
VPS33AQ96AX1 AC092384.3-202ENST00000564646 2873 ntBASIC15.93■□□□□ 0.14
VPS33AQ96AX1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AC002310.6-201ENST00000624451 1377 ntBASIC15.92■□□□□ 0.14
VPS33AQ96AX1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 PAWRP1-201ENST00000451083 565 ntBASIC15.92■□□□□ 0.14
VPS33AQ96AX1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AL022326.1-202ENST00000641533 845 ntBASIC15.92■□□□□ 0.14
VPS33AQ96AX1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS33AQ96AX1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS33AQ96AX1 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.91■□□□□ 0.14
VPS33AQ96AX1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms