Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.22■□□□□ 0.03
HPS1Q92902 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.22■□□□□ 0.03
HPS1Q92902 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.22■□□□□ 0.03
HPS1Q92902 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HPS1Q92902 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HPS1Q92902 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.22■□□□□ 0.03
HPS1Q92902 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 AL161772.1-201ENST00000610494 4412 ntBASIC15.21■□□□□ 0.03
HPS1Q92902 LINC00167-201ENST00000530583 1419 ntBASIC15.21■□□□□ 0.03
HPS1Q92902 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HPS1Q92902 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.21■□□□□ 0.03
HPS1Q92902 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.21■□□□□ 0.03
HPS1Q92902 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.21■□□□□ 0.03
HPS1Q92902 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 AC099336.1-202ENST00000602961 463 ntBASIC15.21■□□□□ 0.03
HPS1Q92902 AC138894.3-201ENST00000603787 634 ntBASIC15.21■□□□□ 0.03
HPS1Q92902 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.21■□□□□ 0.03
HPS1Q92902 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.21■□□□□ 0.03
HPS1Q92902 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HPS1Q92902 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
HPS1Q92902 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS1Q92902 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.2■□□□□ 0.02
HPS1Q92902 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.2■□□□□ 0.02
HPS1Q92902 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HPS1Q92902 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HPS1Q92902 POM121L3P-201ENST00000419331 1163 ntBASIC15.2■□□□□ 0.02
HPS1Q92902 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 DUTP2-201ENST00000519164 463 ntBASIC15.2■□□□□ 0.02
HPS1Q92902 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.2■□□□□ 0.02
HPS1Q92902 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.2■□□□□ 0.02
HPS1Q92902 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.2■□□□□ 0.02
HPS1Q92902 AC104692.2-201ENST00000603054 253 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms