Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S1Q92572 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 AC007292.2-201ENST00000593524 1812 ntBASIC14.6□□□□□ -0.07
AP3S1Q92572 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
AP3S1Q92572 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 HMGA1P5-201ENST00000412453 271 ntBASIC14.6□□□□□ -0.07
AP3S1Q92572 KLF4P1-201ENST00000412782 1185 ntBASIC14.6□□□□□ -0.07
AP3S1Q92572 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.6□□□□□ -0.07
AP3S1Q92572 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S1Q92572 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
AP3S1Q92572 AP000525.1-201ENST00000608286 694 ntBASIC14.6□□□□□ -0.07
AP3S1Q92572 AC079602.3-201ENST00000623931 403 ntBASIC14.6□□□□□ -0.07
AP3S1Q92572 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.6□□□□□ -0.07
AP3S1Q92572 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S1Q92572 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.6□□□□□ -0.07
AP3S1Q92572 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
AP3S1Q92572 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
AP3S1Q92572 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
AP3S1Q92572 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S1Q92572 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S1Q92572 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.6□□□□□ -0.07
AP3S1Q92572 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AP3S1Q92572 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AP3S1Q92572 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S1Q92572 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.59□□□□□ -0.07
AP3S1Q92572 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP3S1Q92572 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 AL390955.1-201ENST00000428694 934 ntBASIC14.59□□□□□ -0.07
AP3S1Q92572 HLA-F-220ENST00000434407 884 ntBASIC14.59□□□□□ -0.07
AP3S1Q92572 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.59□□□□□ -0.07
AP3S1Q92572 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.59□□□□□ -0.07
AP3S1Q92572 ZNF444P1-201ENST00000559497 298 ntBASIC14.59□□□□□ -0.07
AP3S1Q92572 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP3S1Q92572 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.59□□□□□ -0.07
AP3S1Q92572 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP3S1Q92572 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 AL671710.1-201ENST00000610245 2349 ntBASIC14.59□□□□□ -0.07
AP3S1Q92572 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 AL109954.1-202ENST00000564051 2148 ntBASIC14.59□□□□□ -0.07
AP3S1Q92572 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S1Q92572 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
AP3S1Q92572 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.59□□□□□ -0.07
AP3S1Q92572 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
AP3S1Q92572 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.58□□□□□ -0.07
AP3S1Q92572 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S1Q92572 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.58□□□□□ -0.07
AP3S1Q92572 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S1Q92572 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.58□□□□□ -0.07
AP3S1Q92572 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S1Q92572 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S1Q92572 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.58□□□□□ -0.07
AP3S1Q92572 LINC01144-201ENST00000626198 1710 ntBASIC14.58□□□□□ -0.07
AP3S1Q92572 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S1Q92572 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms