Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RN7SKP214-201ENST00000364208 315 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 DUTP2-201ENST00000519164 463 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 RPL17P45-201ENST00000586289 509 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 HLF-202ENST00000430986 1385 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AP000356.3-201ENST00000382243 753 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AL121949.3-201ENST00000406684 385 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 BCAS2P2-201ENST00000425064 674 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MIR3909-201ENST00000579518 119 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MED25-209ENST00000612791 881 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 FAU-201ENST00000279259 461 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 KRT17P5-201ENST00000332088 839 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MIR6069-201ENST00000620069 79 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 Z97205.2-201ENST00000564697 1639 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AC098657.1-201ENST00000416270 1135 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 RN7SL258P-201ENST00000478664 300 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MIR6893-201ENST00000613458 69 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 SLC22A20-204ENST00000530038 1673 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 AC005632.3-201ENST00000605544 308 ntBASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 REXO1L8P-201ENST00000604378 1897 ntBASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SYNE2Q8WXH0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms