Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 DUX4L17-201ENST00000557360 1267 ntBASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 NCF1C-201ENST00000438382 1427 ntBASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTN4IP1Q8WWV3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 AC104640.1-201ENST00000562617 2109 ntBASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 LINC00982-205ENST00000420957 435 ntBASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 DUSP5P1-201ENST00000441325 1139 ntBASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTN4IP1Q8WWV3 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 AC092384.3-202ENST00000564646 2873 ntBASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.96□□□□□ -0.18
RTN4IP1Q8WWV3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms