Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 SIGLEC30P-201ENST00000455569 941 ntBASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 TERC-201ENST00000602385 541 ntBASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 PGM5P2-202ENST00000637225 1043 ntBASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 AC026748.1-201ENST00000624349 3251 ntBASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM4Q8WVI0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 LINC01101-201ENST00000622953 1884 ntBASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 RN7SL606P-201ENST00000472779 293 ntBASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 AC106881.1-201ENST00000605849 3329 ntBASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM4Q8WVI0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms