Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AC103702.1-201ENST00000548801 2630 ntBASIC16.28■□□□□ 0.2
RDH11Q8TC12 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 LAGE3P1-201ENST00000425356 484 ntBASIC16.28■□□□□ 0.2
RDH11Q8TC12 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AC008608.2-201ENST00000606089 416 ntBASIC16.28■□□□□ 0.2
RDH11Q8TC12 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AL592424.1-201ENST00000563624 1536 ntBASIC16.28■□□□□ 0.2
RDH11Q8TC12 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 AC022532.1-201ENST00000624563 1728 ntBASIC16.28■□□□□ 0.2
RDH11Q8TC12 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.28■□□□□ 0.2
RDH11Q8TC12 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.27■□□□□ 0.2
RDH11Q8TC12 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RDH11Q8TC12 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RDH11Q8TC12 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RDH11Q8TC12 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RDH11Q8TC12 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RDH11Q8TC12 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RDH11Q8TC12 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.27■□□□□ 0.19
RDH11Q8TC12 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.27■□□□□ 0.19
RDH11Q8TC12 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RDH11Q8TC12 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RDH11Q8TC12 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RDH11Q8TC12 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RDH11Q8TC12 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
RDH11Q8TC12 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RDH11Q8TC12 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.27■□□□□ 0.19
RDH11Q8TC12 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms