Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 AC012569.1-201ENST00000591191 1524 ntBASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.08□□□□□ -0.15
CLDND2Q8NHS1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.08□□□□□ -0.15
CLDND2Q8NHS1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
CLDND2Q8NHS1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDND2Q8NHS1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CLDND2Q8NHS1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDND2Q8NHS1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 AC093525.9-201ENST00000624961 1746 ntBASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 HMGA1P7-201ENST00000406908 502 ntBASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SPDYE11-202ENST00000450699 704 ntBASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 AC023141.5-201ENST00000458585 616 ntBASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SPDYE9P-201ENST00000570642 692 ntBASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SPDYE10P-202ENST00000612005 668 ntBASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SPDYE8P-202ENST00000612377 668 ntBASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDND2Q8NHS1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 AC007950.2-201ENST00000615045 2347 ntBASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 KRT8P48-201ENST00000515599 1220 ntBASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDND2Q8NHS1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms