Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 MPRIPP1-201ENST00000452433 1089 ntBASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 RERG-205ENST00000537647 935 ntTSL 2 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 PCDHB17P-201ENST00000539533 2393 ntBASIC21.55■■□□□ 1.04
COL22A1Q8NFW1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 AC018735.1-201ENST00000437208 1502 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 C2orf27AP3-201ENST00000434123 579 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 RPSAP36-202ENST00000494591 1261 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 EEF1DP1-201ENST00000585891 896 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 AC097724.1-201ENST00000609581 426 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 AL354718.3-201ENST00000616414 581 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 AC138951.2-201ENST00000623455 1161 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 CR382287.1-201ENST00000623954 586 ntBASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL22A1Q8NFW1 U82695.1-201ENST00000635752 1889 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 AC006001.1-201ENST00000325130 474 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 AP002490.2-201ENST00000524791 560 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 AC078819.1-201ENST00000547454 765 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 AC012085.1-201ENST00000548270 765 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 AL096828.3-201ENST00000615354 462 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 REXO1L8P-201ENST00000604378 1897 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 AC092053.1-201ENST00000605787 1936 ntBASIC21.53■■□□□ 1.04
COL22A1Q8NFW1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 AC107373.2-201ENST00000607735 490 ntBASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL22A1Q8NFW1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL22A1Q8NFW1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL22A1Q8NFW1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL22A1Q8NFW1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.52■■□□□ 1.03
COL22A1Q8NFW1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC21.51■■□□□ 1.03
COL22A1Q8NFW1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms