Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 AP3S2-216ENST00000617003 1561 ntBASIC17.71■□□□□ 0.43
BEST2Q8NFU1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 RARRES2P9-201ENST00000565168 469 ntBASIC17.71■□□□□ 0.43
BEST2Q8NFU1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 MIR6080-201ENST00000617359 66 ntBASIC17.71■□□□□ 0.43
BEST2Q8NFU1 AC093512.1-201ENST00000617969 520 ntBASIC17.71■□□□□ 0.43
BEST2Q8NFU1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST2Q8NFU1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BEST2Q8NFU1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
BEST2Q8NFU1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BEST2Q8NFU1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
BEST2Q8NFU1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
BEST2Q8NFU1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BEST2Q8NFU1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.7■□□□□ 0.42
BEST2Q8NFU1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST2Q8NFU1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 FAM220BP-201ENST00000377689 816 ntBASIC17.69■□□□□ 0.42
BEST2Q8NFU1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 AC051619.7-201ENST00000568314 623 ntBASIC17.69■□□□□ 0.42
BEST2Q8NFU1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms