Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 KRT18P38-201ENST00000449496 1282 ntBASIC14.34□□□□□ -0.11
BEST4Q8NFU0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 AC073912.3-201ENST00000624414 853 ntBASIC14.34□□□□□ -0.11
BEST4Q8NFU0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.34□□□□□ -0.11
BEST4Q8NFU0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.33□□□□□ -0.11
BEST4Q8NFU0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 KLF4P1-201ENST00000412782 1185 ntBASIC14.33□□□□□ -0.12
BEST4Q8NFU0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 AC005336.2-201ENST00000593183 939 ntBASIC14.33□□□□□ -0.12
BEST4Q8NFU0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
BEST4Q8NFU0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms