Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 SLC25A39P2-201ENST00000537614 270 ntBASIC17.37■□□□□ 0.37
TTC16Q8NEE8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 MIR6080-201ENST00000617359 66 ntBASIC17.37■□□□□ 0.37
TTC16Q8NEE8 AL136317.3-201ENST00000618497 906 ntBASIC17.37■□□□□ 0.37
TTC16Q8NEE8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC16Q8NEE8 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.37■□□□□ 0.37
TTC16Q8NEE8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 MIR943-201ENST00000401286 94 ntBASIC17.36■□□□□ 0.37
TTC16Q8NEE8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 MIR3197-201ENST00000582241 73 ntBASIC17.36■□□□□ 0.37
TTC16Q8NEE8 AC027307.2-201ENST00000591252 911 ntBASIC17.36■□□□□ 0.37
TTC16Q8NEE8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 TUBB3P1-201ENST00000405796 1332 ntBASIC17.36■□□□□ 0.37
TTC16Q8NEE8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC16Q8NEE8 MIR600HG-201ENST00000449175 5984 ntBASIC17.35■□□□□ 0.37
TTC16Q8NEE8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 AL671710.1-201ENST00000610245 2349 ntBASIC17.35■□□□□ 0.37
TTC16Q8NEE8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.35■□□□□ 0.37
TTC16Q8NEE8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC16Q8NEE8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms