Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 TIMM8BP1-201ENST00000452384 211 ntBASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 AC005622.1-201ENST00000636801 1703 ntBASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCUBE3Q8IX30 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AC211486.1-202ENST00000416371 468 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 SPDYE11-202ENST00000450699 704 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AC211476.1-201ENST00000503899 468 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AC079140.1-201ENST00000508039 487 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 SPDYE9P-201ENST00000570642 692 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 SPDYE10P-202ENST00000612005 668 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 SPDYE8P-202ENST00000612377 668 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AC073439.1-201ENST00000624121 1774 ntBASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCUBE3Q8IX30 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.33■□□□□ 0.37
SCUBE3Q8IX30 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SCUBE3Q8IX30 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCUBE3Q8IX30 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms