Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 REXO1L8P-201ENST00000604378 1897 ntBASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 AC068587.6-202ENST00000641839 5619 ntBASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 AP000523.1-201ENST00000398242 1049 ntBASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TSPY7P-201ENST00000431358 1114 ntBASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 AC019129.2-201ENST00000609837 1235 ntBASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 AC010947.1-201ENST00000623454 693 ntBASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD2Q8IV50 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 HMGA1P5-201ENST00000412453 271 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms