Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 LINC00265-3P-201ENST00000447588 903 ntBASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 BX005266.1-201ENST00000473402 457 ntBASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 AC074051.2-201ENST00000565115 352 ntBASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 AP002414.4-201ENST00000589764 1148 ntBASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 AC131009.4-201ENST00000624048 1740 ntBASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 MIR5100-201ENST00000579544 119 ntBASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 AC091167.2-201ENST00000579581 588 ntBASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 AC092329.2-201ENST00000598402 547 ntBASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM1Q86UE6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 AC087163.2-201ENST00000457299 853 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms