Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 CRYGEP-201ENST00000412192 528 ntBASIC15.23■□□□□ 0.03
ZNF550Q7Z398 VN2R19P-201ENST00000442399 1052 ntBASIC15.23■□□□□ 0.03
ZNF550Q7Z398 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 AC040169.1-201ENST00000565382 521 ntBASIC15.23■□□□□ 0.03
ZNF550Q7Z398 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF550Q7Z398 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AC092364.2-201ENST00000596710 2692 ntBASIC15.22■□□□□ 0.03
ZNF550Q7Z398 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AL031432.2-201ENST00000566714 459 ntBASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AL928711.1-201ENST00000570165 459 ntBASIC15.22■□□□□ 0.03
ZNF550Q7Z398 AC021097.1-201ENST00000607902 574 ntBASIC15.22■□□□□ 0.03
ZNF550Q7Z398 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF550Q7Z398 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms