Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 AC093724.1-201ENST00000448659 1027 ntBASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 GIMAP3P-201ENST00000495150 836 ntBASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 BANF1P1-201ENST00000553684 263 ntBASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC149Q6ZUS6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC149Q6ZUS6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC149Q6ZUS6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CCDC149Q6ZUS6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC149Q6ZUS6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC149Q6ZUS6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 AC135586.1-201ENST00000539323 574 ntBASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 HILS1-202ENST00000545329 423 ntBASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 AC026979.3-201ENST00000607315 403 ntBASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 AL133215.2-201ENST00000609242 977 ntBASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC149Q6ZUS6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 AP006294.1-201ENST00000415407 339 ntBASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 DFFBP1-201ENST00000433250 979 ntBASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms