Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00299Q6ZSB3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00299Q6ZSB3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00299Q6ZSB3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC00299Q6ZSB3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC00299Q6ZSB3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00299Q6ZSB3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00299Q6ZSB3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LINC00299Q6ZSB3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00299Q6ZSB3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00299Q6ZSB3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC00299Q6ZSB3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00299Q6ZSB3 AC140479.7-201ENST00000636301 2332 ntBASIC14.46□□□□□ -0.1
LINC00299Q6ZSB3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00299Q6ZSB3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 CDCA4P2-201ENST00000441182 718 ntBASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 LINC01238-205ENST00000567549 1107 ntBASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 AP005242.2-201ENST00000580065 1175 ntBASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 AC080038.1-201ENST00000611274 1154 ntBASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LINC00299Q6ZSB3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 AP003733.1-201ENST00000491725 852 ntBASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 AC233263.1-201ENST00000578059 224 ntBASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms